PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36175

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 426aa MW: 48743.6 Da PI: 8.3974

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36175	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.6	1.9e-12	74	126	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ +hn+ Er+RR+++N +++Lr+llP+a + ++kKls ++ + eYI +L OIT36175 74 KKLSHNASERNRRKKMNFLYSTLRSLLPPA-NLKKKKLSFPATISYVQEYIPEL 126 6789***********************6.589999************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MLAFSSSIFP NMSSEWSFEE AQKYDQQNNY ILQNENTNDL FEGLHIDNIQ YSPSSYQQQY 60 YKEDSCDNQS LMAKKLSHNA SERNRRKKMN FLYSTLRSLL PPANLKKKKL SFPATISYVQ 120 EYIPELKKEI EKLSQTKDLL LSKKAGSLVQ PNNINQRNTT SSASSISISA SPLCNGQVLV 180 QISTTQTSFP ISQVFQTLEE DGYLLLNATS FKSSGEKIFH NLHFQMQGTV GMEIQSLKTK 240 LLVINLHSCP RAFTHAKSQD TFKQFLEEFI QSQPTDDQGK PIQPSEENNM DLWIKAAGGV 300 HKQRVYVLGS EFSSSRRSFG SAGSSSLSSS INQDEFELLN RSIAEITELY AKERIAREEK 360 AKRREEEDRR REEEERRREE EERRKDAAFT RVTGDVESLK AQLNYLLASG AFPLPRSPSR 420 FNKTKE

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MLAFSSSIFP NMSSEWSFEE AQKYDQQNNY ILQNENTNDL FEGLHIDNIQ YSPSSYQQQY  60
YKEDSCDNQS LMAKKLSHNA SERNRRKKMN FLYSTLRSLL PPANLKKKKL SFPATISYVQ  120
EYIPELKKEI EKLSQTKDLL LSKKAGSLVQ PNNINQRNTT SSASSISISA SPLCNGQVLV  180
QISTTQTSFP ISQVFQTLEE DGYLLLNATS FKSSGEKIFH NLHFQMQGTV GMEIQSLKTK  240
LLVINLHSCP RAFTHAKSQD TFKQFLEEFI QSQPTDDQGK PIQPSEENNM DLWIKAAGGV  300
HKQRVYVLGS EFSSSRRSFG SAGSSSLSSS INQDEFELLN RSIAEITELY AKERIAREEK  360
AKRREEEDRR REEEERRREE EERRKDAAFT RVTGDVESLK AQLNYLLASG AFPLPRSPSR  420
FNKTKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	132	KKKKLSFPATISYVQEYIPELKKEIEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	3e-26	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIT36175