PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36053

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 355aa MW: 40255.6 Da PI: 5.9953

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36053	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.5	7.8e-30	132	192	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ g+++prsYYrCt++ +C+++k+v+rs++dp ++eitY+g+H+++ OIT36053 132 DDGYSWRKYGQKDILGAKYPRSYYRCTYRlvqNCWATKQVQRSDDDPALFEITYKGSHTCN 192 8*************************9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDCGFNWEYN SLINELTQGM EHAKQLRAYF SSTTSSDNIQ ELHLHMQIIL SSFENSLSIL 60 KWTDSITQTP QIVVAPTSIS VDKISPKTVD LNGNFKDNDQ DLRYVSKKRK QLPTWTEQVR 120 VSAENGYEGP TDDGYSWRKY GQKDILGAKY PRSYYRCTYR LVQNCWATKQ VQRSDDDPAL 180 FEITYKGSHT CNQAFNSAAQ PTSPEKHEFK KQANNPKIVQ SNQMLTNLQA SLRVNTNDLN 240 KKETTCSFPF SPTFSGFVDG NLHFQVSQVD DNLVGGYSPS FVSPTTPESS YFSLPSCQMN 300 GSRRIHSLHH SESDLPDLFS ANTSSTSSPI VGLEFPLEHV ELDPNFPFDN SEFFR

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDCGFNWEYN SLINELTQGM EHAKQLRAYF SSTTSSDNIQ ELHLHMQIIL SSFENSLSIL  60
KWTDSITQTP QIVVAPTSIS VDKISPKTVD LNGNFKDNDQ DLRYVSKKRK QLPTWTEQVR  120
VSAENGYEGP TDDGYSWRKY GQKDILGAKY PRSYYRCTYR LVQNCWATKQ VQRSDDDPAL  180
FEITYKGSHT CNQAFNSAAQ PTSPEKHEFK KQANNPKIVQ SNQMLTNLQA SLRVNTNDLN  240
KKETTCSFPF SPTFSGFVDG NLHFQVSQVD DNLVGGYSPS FVSPTTPESS YFSLPSCQMN  300
GSRRIHSLHH SESDLPDLFS ANTSSTSSPI VGLEFPLEHV ELDPNFPFDN SEFFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	110	LRYVSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	2e-62	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT36053