PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36042
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 358aa    MW: 38721.7 Da    PI: 9.747
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36042genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.21.6e-3772131362
    zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
               e+ +kcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+
  OIT36042  72 EAVQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSN 131
               56789****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MVFSSISASY LDPANWQQQA GHSIQNPQFQ SVQPQRTLAA PPPVQTHVGG GGTIRPGSMA  60
DRARLANIPM AEAVQKCPRC ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRSVPV  120
GGGCRRNKRS NSSTKATNNN NNTPKSPASS TSTGGCRQIP TNSGSTSNNN NNFSSPSSAA  180
SLLGLMTPQI HHPLRFMSPL GHLTDNHHFT PSNDNNITMN YSAISSSSAP GTNESMNFQL  240
GMGGNLEQWR LQQQVANQFP NFYGGLDSSS ASGLYPFHPA YYTSNDAGGV TVTSSQIRPK  300
ITNPMLTQLA LMKMEDNHEH SSLSRQFVGN PGNENWSNGS GWNELSASFS SSSTSNAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.13e-47Dof family protein