PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT35945 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 25725.2 Da PI: 8.6718 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.4 | 3.9e-21 | 12 | 139 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +G+rFhPt+ el+ ++Lk+ ++g++l+ e ++ +diy Pw++ + ++ eek y F++ +k++++ +r +r+ ++ +Wk + ++++ kg++v OIT35945 12 MGVRFHPTEAELI-NFLKRFLKGEPLPSECPnFQLADIYGDqPPWEIFGASDHpEEKVRYIFTRLKKQKSEHTRVRRTCANRTWKGQTGIDPIKNGKGTVV 111 7************.9**********88755559999***87368***743333255566******************999*****888889****9***** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g ++ + f + +++ ++ W+m+ey++ OIT35945 112 GFRRCFKFQTSSKEGEHNKIWLMKEYSV 139 *********88888888999******86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MLTVPAARRR TMGVRFHPTE AELINFLKRF LKGEPLPSEC PNFQLADIYG DQPPWEIFGA 60 SDHPEEKVRY IFTRLKKQKS EHTRVRRTCA NRTWKGQTGI DPIKNGKGTV VGFRRCFKFQ 120 TSSKEGEHNK IWLMKEYSVG DDFCRENNIA KEDIVVCRIK KNIRSKKNHG VNMEEQDVPK 180 VIEAMLHGPD EDYCTTVQPA TICQAADQHQ VNDWSNYQQE VN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 9e-13 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT35945 |