PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35930
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 335aa    MW: 37316.4 Da    PI: 6.3205
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35930genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-1058107154
               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               r++ +  rE+ RRdr+N+ f eL + l ++     +K++Ka+iL  +v+ +k+L
  OIT35930  58 RKVQKADREKLRRDRLNEQFMELGKTLDPD----RPKNDKASILSDTVQMLKDL 107
               5677889********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MDQLNNGAMY QSNHLSNHCL AELNQLPSDV AMPPNGFHSE SSTKQQPEAE LKDSLTARKV  60
QKADREKLRR DRLNEQFMEL GKTLDPDRPK NDKASILSDT VQMLKDLTAQ VSRLKSEYAA  120
LTDESRELTQ EKNDLREEKA SLKSDIESLN AQYQQRVRTM YPWAGMDHSM VMHPPSYSYP  180
MPVPVPAGPV PMHPSLQPYP FFSNQNPAVV PNPCSSFVQY MTPNTLIEQQ SAQYMSSIIP  240
PGSMTRQDSR NKSSDQGESR IEKSEDSNEV ATDLELKTPG SASDQDHSSG QRKSKKMSKK  300
DNSLTDGSSS SRCSSSHSVQ AISSNSVVRG TKTDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.16e-86bHLH family protein