PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35916
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 313aa    MW: 33749.1 Da    PI: 6.3746
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35916genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.2e-15226261134
      GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
               C++Cg ++  Tp++Rrgp g+++LCnaCGl ++ kg
  OIT35916 226 CRHCGISSkfTPMMRRGPAGPRSLCNACGLTWANKG 261
               *****99999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MYRRETMNGT VHQERHQQTH FAEGKDDDDD VDVDGGGGGG ESIDDPSHHI RYDHNYHHAL  60
HNGGAGATME EAAALNVVEG VAHNALYVPG VGSSNQLTLS FRGQVFVYPD VSPEKVQAVM  120
LLLDGYEVPT GTAAVNVASQ SNWASSEGPG RLNQPQRAAS LSRFREKRKE RCFDKKIRYT  180
VRKEVALRMQ RKKGQFTSSK SISDEAGSSS AEGNAGSSQE EPETSCRHCG ISSKFTPMMR  240
RGPAGPRSLC NACGLTWANK GILRDLSKVS TAGAPDHTVK SSEQSNDEAN GSDAMAASGI  300
ITSDDENTVL PRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-70GATA family protein