PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT35836 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 168aa MW: 19251.1 Da PI: 8.9229 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.1 | 0.0012 | 44 | 66 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H OIT35836 44 FECKTCNRKFPSFQALGGHRASH 66 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 11.1 | 0.0013 | 92 | 114 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F L H+r+H OIT35836 92 HECSICGLEFALGQALGGHMRRH 114 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
KREEEDFHSM KTIANCLMLF SNQSNDYHFD NIMKYNNSTT NRVFECKTCN RKFPSFQALG 60 GHRASHKKPR LNMRELNNLQ LFQLPNIKPK THECSICGLE FALGQALGGH MRRHRIVITT 120 TTTTATAQSQ TIPLVKKLNG QRVLCLDLNL TPLENDHLEF NLGADCFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 7e-42 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT35836 |