PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35741
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 237aa    MW: 26391.2 Da    PI: 10.2662
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35741genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-104792454
              HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
              +h ++Er+RR+riN  +++L++l P++     +K +K+ +L++Av  +k+L
  OIT35741 47 THAMAERKRRERINAHLHTLKKLFPHL-----PKKDKSRVLTEAVTQLKEL 92
              8*************************8.....699**********999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MLSSLQGCNG FLERENSVQL VHQRNSKVVD EYGKSTRKNK SKDAALTHAM AERKRRERIN  60
AHLHTLKKLF PHLPKKDKSR VLTEAVTQLK ELRKKVAQQM ETQKDSEGNY NGLSSFFLPG  120
ENDEVLVNYS KESDSDERTV KATVCCEDRP GLNRDLSVAV RLVQGRVIKA EMATVGGRTK  180
AEMVVVLCKV GGGEKDIAQL RRALKSVVEN RALGLGSSLN LGRRLGDNKW ACFGGLE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15257ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.13e-25bHLH family protein