PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35543
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 297aa    MW: 34272.7 Da    PI: 6.6236
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35543genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.43.8e-55161421129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               lppGfrFhPtdeel+++yL +kv ++++ + ++i evd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++  ++lvg
  OIT35543  16 LPPGFRFHPTDEELITHYLSPKVVDSSFCA-RAIGEVDLNKIEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFK-LKTLVG 114
               79*************************998.89***************888999***************************************9.899*** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
               +kktLvfy+grap+gek++Wvmheyrle
  OIT35543 115 MKKTLVFYQGRAPRGEKSNWVMHEYRLE 142
               **************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEKISGSCGD EEEMELPPGF RFHPTDEELI THYLSPKVVD SSFCARAIGE VDLNKIEPWD  60
LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIFKLK TLVGMKKTLV  120
FYQGRAPRGE KSNWVMHEYR LEGKYSVHNL PQTAKNEWVI CRIFKKSAGG KKIHISGLIK  180
NNNINDNSMS SNLPPLMDIS SYDSQITTTT TTCKGETSNY SHVTCFSNSI VDQKPQTSLA  240
DDLTTNNNPY VENFQYGDFG LMQDHSILRL LFENKESEPK QNYDMRAYED LDCLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.11e-117NAC family protein