PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT35488 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 228aa MW: 26164.6 Da PI: 5.272 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.9 | 9.9e-10 | 78 | 125 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rEr RR+++N++f+eL ++l + + K +K++iL A++ +++L OIT35488 78 SKACRERIRREKLNERFSELCSVLEPG---RPVKTDKMAILGDAIRVLNEL 125 6789**********************8...89**************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MDQLDSFRDN SWDLIDINSF IDEAPSDFFW NHQIQNQNQK AVAALEAPLS SATFQEECIE 60 TECPRKRGRN ESCSKQGSKA CRERIRREKL NERFSELCSV LEPGRPVKTD KMAILGDAIR 120 VLNELKTESE EYKEMNQKLM EEIKTLKAEK NELREEKLAL KAEKERMEQE LKATATPASF 180 IPPHPAAYQP AVNKMAVFPS YGYVPMWQYL PPSSRDTSQD HALRPPAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14410.2 | 1e-59 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT35488 |