PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35480

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 386aa MW: 42408.5 Da PI: 7.6135

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35480	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.2e-39	56	116	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ + OIT35480 56 QQPPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 116 56789*****************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MLGDCEKMVL IPSSTTNEWP QQNNQSDEKT LMMSSNGSSD MEKPIQDPQQ QQQQQQQPPL 60 KCPRCDSSNT KFCYYNNYSL SQPRHFCKAC KRYWTRGGTL RNVPVGGGCR KNKRIKRPSA 120 SSSSTHDITI TSSSALNNNI SATNPSHHHH IHGSHNIDLS STTSSNHLNP LFYGLNTERS 180 DLSNNPFARL FSSRVSNATD EGQVYSLTDS IPGLDRRLGL GFSSSSGLMG ENNYGHGFNS 240 IKQIQDVMTN SNTTNSSSLL SSYPMFGSSS TSSSTSTMAS LIASSLQQQK FISNGNNFHG 300 LAPYEELQMS GNNNTNNVEG GNGMTMLKEE KMEGGGQNRL NWNNLSNHQN HQINEQIMNS 360 SDPSLSWNGA WLDPSNMGSN SVPSLI

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MLGDCEKMVL IPSSTTNEWP QQNNQSDEKT LMMSSNGSSD MEKPIQDPQQ QQQQQQQPPL  60
KCPRCDSSNT KFCYYNNYSL SQPRHFCKAC KRYWTRGGTL RNVPVGGGCR KNKRIKRPSA  120
SSSSTHDITI TSSSALNNNI SATNPSHHHH IHGSHNIDLS STTSSNHLNP LFYGLNTERS  180
DLSNNPFARL FSSRVSNATD EGQVYSLTDS IPGLDRRLGL GFSSSSGLMG ENNYGHGFNS  240
IKQIQDVMTN SNTTNSSSLL SSYPMFGSSS TSSSTSTMAS LIASSLQQQK FISNGNNFHG  300
LAPYEELQMS GNNNTNNVEG GNGMTMLKEE KMEGGGQNRL NWNNLSNHQN HQINEQIMNS  360
SDPSLSWNGA WLDPSNMGSN SVPSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	5e-37	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT35480