PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35367
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB
Protein Properties Length: 293aa    MW: 32248 Da    PI: 8.8998
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35367genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.91.3e-09956347
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                      W+ eE++ + +a++ +  +    +W +Ia++++  +t  ++k ++q +
         OIT35367  9 MWSREEEKAFENAIAIHWIEdsklQWQKIASMVP-SKTIQELKQHYQLL 56
                     5*****************99**************.***********965 PP
2Myb_DNA-binding38.33.1e-12132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r     Rt+ q+ s+ qky
         OIT35367 132 PWTEEEHRLFLLGLDKFGKGDWRSISRNYVISRTPTQVASHAQKY 176
                      7*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MSTSTSSLMW SREEEKAFEN AIAIHWIEDS KLQWQKIASM VPSKTIQELK QHYQLLVDDV  60
TAIEAGNVPI PLYTGEETSS STKDSSHGYS GISNGRSNCS YVNGFSGSVH DQIGQGGKGS  120
SKSEQERRKG IPWTEEEHRL FLLGLDKFGK GDWRSISRNY VISRTPTQVA SHAQKYFIRL  180
NSMNRDRRRS SIHDVTSVNN GEVATNQTPI TGQQTNPSPS NAVGPNLGQR NQPNMHGLSM  240
YGAPMGHPVA APPGHHVSAV GTPIMLPPGH HPPYVLPVGY HMPPHPPPPM HHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-74MYB family protein