PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35143
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 327aa    MW: 37299.2 Da    PI: 7.18
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35143genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.53e-54191451129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               lppGfrFhPtdeel+++yL kkv + ++++  +i evd++kvePw+Lp k+k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkdke+++ +++lvg
  OIT35143  19 LPPGFRFHPTDEELITHYLSKKVVDIDFTA-IAIGEVDMNKVEPWELPWKAKIGEKEWYFFCVRDKKYPTGLRTNRATAAGYWKATGKDKEIFR-GKSLVG 117
               79*************************999.88***************98999*****************************************.999*** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
               +kktLvfykgrapkgekt+Wv heyrle
  OIT35143 118 MKKTLVFYKGRAPKGEKTNWVTHEYRLE 145
               **************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MENFSGVVKE DDQQQQMELP PGFRFHPTDE ELITHYLSKK VVDIDFTAIA IGEVDMNKVE  60
PWELPWKAKI GEKEWYFFCV RDKKYPTGLR TNRATAAGYW KATGKDKEIF RGKSLVGMKK  120
TLVFYKGRAP KGEKTNWVTH EYRLEGRLSL HNLPRTAKND WVICRVFQKT TGGKKIHISG  180
IMQSNTTGDE IGNSLLPPLT DSSPSHVHCF SNFLTAQKSE DNMINYFDTS PNFAPLSNPM  240
DIFPRNSLPN TFSWNQTVPF PQPGSFPVQD PAVLRNLLEN YGQNMQQSLK KEKDMVSVSQ  300
ETGLSTDINT EITSSVVQQD LDCLWTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-122NAC family protein