PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT35062

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 286aa MW: 31965.2 Da PI: 4.2695

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT35062	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.5	5.8e-38	22	80	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +a +cprC stntkfCyynnyslsqPryfCkaCrryWtkGG+lrnvPvGgg+rk+++s+ OIT35062 22 HAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKSRRSR 80 6779***************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MLAFPSKPMI MMERNRKSNV EHAPNCPRCA STNTKFCYYN NYSLSQPRYF CKACRRYWTK 60 GGSLRNVPVG GGCRKSRRSR STKKDDNNLL TPNPALSGNE AAGADIDLAD VFAKYLNQGT 120 TNDHDHDQDN ILQESPLADQ DYCSIGASLS NSPSLDSLVN PSSFENESQL DEAIIMGNYQ 180 DYPCGFLQEE QIQGGGSIHE VSGQDFLEFN PSFVEMQSML GDEIMGQGEE FDYNTSLAWQ 240 PMIQFQEFGS ILEDDDQLKI STANLASDNN YGSSFDLSSY EIFTRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	1e-37	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT35062