PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT34598

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 571aa MW: 65488.8 Da PI: 6.174

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT34598	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.2	4.4e-55	4	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv +yLk+k++g+k+el ++i+evd+yk+ePwdLp k + +++ ewyfFs+ ++ky++g+r+nratk+gyWkatgkd++v s ++++ OIT34598 4 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-DIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPCNRKYPNGSRTNRATKAGYWKATGKDRTVNS-QTRA 102 79**************************.99***********6434555777*********************************9.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLv+y+grap+g +tdWvmheyrl OIT34598 103 IGTKKTLVYYRGRAPHGARTDWVMHEYRL 131 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MVSLPPGFRF HPTDEELVAY YLKRKINGRK IELDIIPEVD LYKCEPWDLP GKSLLPSKDL 60 EWYFFSPCNR KYPNGSRTNR ATKAGYWKAT GKDRTVNSQT RAIGTKKTLV YYRGRAPHGA 120 RTDWVMHEYR LDEKECEVAN GLQDAYALCR IFKKSLNAPK VVDPYSSDQS SSIDLYSDGK 180 CDDNMESSNY TRPTQSSPLH VAPAGPTDDD KWIKYLSSDE AFSFNSTTNP SIPNYGTLPY 240 APPKVNIALE CARLQHRFVL PPLEVQDFPQ ADYVNYSTIL PQSSYDNIHQ NTNQTDIVQE 300 MFSVAQASHD HINQDSLIGN YTQTADGFSF LPHHDNQIHD LGSFNFDEDI KSDRIVENLR 360 WIGMSDMDLE KAFLEDYKTV TIKNVSGVLK EEYENEGETS GHNSSFNEFI NKTEDFSSEF 420 GNDFEVYEKI EVNHRMFIAT QQAAKTFYHQ VVPSTTLTVH QNLVKSDLIK IPQNTTFFDC 480 ILRKKLLIIR PWKRAVSTLV GVIALLHAFW IYFSLCLENE GSIEDNIEGS EKKKIKKGQD 540 CQWICKAKKW PYFTLVLALS TIWLHQIVPS F

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MVSLPPGFRF HPTDEELVAY YLKRKINGRK IELDIIPEVD LYKCEPWDLP GKSLLPSKDL  60
EWYFFSPCNR KYPNGSRTNR ATKAGYWKAT GKDRTVNSQT RAIGTKKTLV YYRGRAPHGA  120
RTDWVMHEYR LDEKECEVAN GLQDAYALCR IFKKSLNAPK VVDPYSSDQS SSIDLYSDGK  180
CDDNMESSNY TRPTQSSPLH VAPAGPTDDD KWIKYLSSDE AFSFNSTTNP SIPNYGTLPY  240
APPKVNIALE CARLQHRFVL PPLEVQDFPQ ADYVNYSTIL PQSSYDNIHQ NTNQTDIVQE  300
MFSVAQASHD HINQDSLIGN YTQTADGFSF LPHHDNQIHD LGSFNFDEDI KSDRIVENLR  360
WIGMSDMDLE KAFLEDYKTV TIKNVSGVLK EEYENEGETS GHNSSFNEFI NKTEDFSSEF  420
GNDFEVYEKI EVNHRMFIAT QQAAKTFYHQ VVPSTTLTVH QNLVKSDLIK IPQNTTFFDC  480
ILRKKLLIIR PWKRAVSTLV GVIALLHAFW IYFSLCLENE GSIEDNIEGS EKKKIKKGQD  540
CQWICKAKKW PYFTLVLALS TIWLHQIVPS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-135	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT34598