PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT34573 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 32032.6 Da PI: 9.3013 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.9 | 1.1e-08 | 25 | 69 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+eE +++ a + + +W ++a ++ g+t +++ + OIT34573 25 EWTQEENKKFESALAIYDETtpnRWFKVADLIP-GKTVYDVMKQYK 69 7*****************99*************.*******98876 PP | |||||||
2 | Myb_DNA-binding | 40.6 | 5.7e-13 | 129 | 173 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r + +t+ q+ s+ qky OIT34573 129 PWTEEEHRRFLMGLDKHGKGDWRNISRNFVISKTPTQVASHAQKY 173 8*****************************789***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
METLSPTSLI PNSSWMMMEQ RKSSEWTQEE NKKFESALAI YDETTPNRWF KVADLIPGKT 60 VYDVMKQYKE LAADVSDIEA GLFPVPRTYF ASSFMLDLVD DHHYHHHRGV QAFRKRGRSS 120 DQERKKGVPW TEEEHRRFLM GLDKHGKGDW RNISRNFVIS KTPTQVASHA QKYYLRQLSG 180 GKDKRRPSIH DITTVNLTNI DLSDNNLNNN NNNNKSLSSF AVNIPFQNSN DGALMAFGSS 240 YNSSSYTYEL GSVLSRGRYG TDNISANDNS QIQRYQIWG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 126 | RKRGRSSDQERKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 7e-82 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT34573 |