PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34345
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 347aa    MW: 38268.4 Da    PI: 7.9472
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34345genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13153200355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               + h  +Er+RR+r+ ++f  L +l+P++     kKl+Ka++L  A+++Ik+L+
  OIT34345 153 QDHVVAERKRRERLTQRFIALSTLIPNL-----KKLDKATVLGDAIKHIKQLE 200
               56999***********************.....9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDFSSAKWWA EMETMSTDDH AYINHCQMMT QLDELPFNKP FSYDIQPCHA AAGILDVKPP  60
FCGGYATETH QMTAFSPPPL NSSSVLSSCK FNSPSANTEL PSGTTLNFSS SSVLSMDSDD  120
FGDSQNLMQA LGFGTADITV QKKSYNRTSL QAQDHVVAER KRRERLTQRF IALSTLIPNL  180
KKLDKATVLG DAIKHIKQLE EQVKTLEEKA KKRNSKEAVV AVKRPRLASS TSDRYSSSSE  240
DNVSSVSTDR SQPDIKVRAS DGNNILISIS CKKQTGIIKE IFSQVEKLKL SIISSSVMPF  300
AHTTTHITII AQMDHKLGMT AKNDANRIHA AIMKLIGGQE EEAPFTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159164ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-37bHLH family protein