PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT34229 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 27150 Da PI: 6.966 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.5 | 6.5e-05 | 36 | 84 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 +r+ + erE+ R+++N+ f L l + + + Ka+iL ++ +++k+ OIT34229 36 KRVHKAEREKLKREHLNELFLDLANALELS----EQTNGKASILNETARFVKD 84 79999**********************998....68899999***99999886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 242 aa Download sequence |
MGAESPTSSA ENGGIAVETS PNGSLPCKKI RKKVPKRVHK AEREKLKREH LNELFLDLAN 60 ALELSEQTNG KASILNETAR FVKDMISQIK HLKRENTALL SESQYLSMEK KELQDDNSTL 120 EAQIGKLESE IKERVAETNL DLNLSLPETQ LPQLASQVTD NFLRLPGSEH PFQQMQMMNP 180 LYVVPLNSTP QAYPQPDNAK PAAMPTYSVK KPQARYPTPV DVWPSQILEK RPQLGQEVQI 240 SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G47640.2 | 4e-44 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT34229 |