PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT34161
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 415aa    MW: 46735.1 Da    PI: 6.0735
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT34161genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.6e-09223268454
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               +h   E++RR +  ++f+ Lr l+P++      K++ a+i   A+ YI +L
  OIT34161 223 KHHTSEKQRRVHFSDKFQALRALIPNP-----SKNDRATIIADAIGYIDML 268
               68899*********************9.....7***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MYAESLSFDP TSHQDEGIEE KGLLQNHSTT CATNFSMGVE LQQQQQLNLE MVKFHSTLNT  60
NIVPTENNLI QEFEHEHNNN TVLSYGQANW EEMGFNPYNH QQGHEQHQIS NFPISTLITN  120
NPSNTSLGYW VGFPRTELAS TSTNLFYDPQ LNMPVNLCTP QPTLFKELFQ LSPHGSYGLG  180
SSGTGSFFSH GVAEEEVTGA LYHDAGSFDI NSAAKKKEGK DIKHHTSEKQ RRVHFSDKFQ  240
ALRALIPNPS KNDRATIIAD AIGYIDMLKS KVNELKNEVE KKERVKRQRT EDDGSCGFNT  300
VMAEAAENNV NIRSSWLQKK SKNTEVDVRI MDDEVTVKLV QHHKRMNCLL FVSKAFDEFQ  360
LDLHHVSGGL IGDHYSYLFN SKICEGSTVY ASAIANKVIE VLDKEYSAIV PSCNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.15e-56bHLH family protein