PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT33762 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 349aa MW: 38797.1 Da PI: 6.4012 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.5 | 8.2e-15 | 36 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl OIT33762 36 KGLWSPEEDEKLMHYMLTNGQGCWSDVARNAGLQRCGKSCRLRWINYL 83 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.7e-16 | 89 | 132 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ +lG++ W+ Ia +++ gRt++++k++w++ OIT33762 89 RGAFSPQEEELIIHLHSLLGNR-WSQIAGRLP-GRTDNEIKNFWNS 132 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MRKPEFSSSS SGKNGTNSNN NNNNNNNNNA NVKLRKGLWS PEEDEKLMHY MLTNGQGCWS 60 DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI IHLHSLLGNR WSQIAGRLPG 120 RTDNEIKNFW NSSLKKRLKN SSSSSTPSPN ASDSSSEPCK DLNMGVNQGF MSMEKHKLMA 180 MYMDSTSSSS SSMALNTIID PLPTLEHSLM NMPSRFGAPS YLTTQPCMAQ GGNVTNGSLF 240 YGNNHGIFGG NLGIGGEIYV PPLESVSIEY QNVEVGNIVE RSSQNNNPNN NMTNLNNSHF 300 MNSSSNIKVE NFGGIGNYWE GDDLKVGEWD LEELMKDVSP FPFLDFQIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 3e-53 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT33762 |