PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33671

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

FAR1

Protein Properties

Length: 666aa MW: 76226.7 Da PI: 8.2858

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33671	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65	2.1e-20	55	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY e+A+ +GFs+r+++++ + + t+r fvC + g++ + +++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel OIT33671 55 EFYAEFARGCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKAANDNKPQRNRKSSRCGCQAYMRISKTTdlgVPEWRVTGFMNHHNHELL 148 6************9998877356667999************99******************99777789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MMVLYGDSSD QRSLSLDDTS STEESPDQTR LSLETTNDAV PYIGQRFPTH DAAYEFYAEF 60 ARGCGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPVKA ANDNKPQRNR KSSRCGCQAY 120 MRISKTTDLG VPEWRVTGFM NHHNHELLEP NQVRFLPAYR SISDSDKSRI LMFAKTGISV 180 QQMMRLMELE KGVEPGFLPF TEKDVRNLLQ SFRKVDPEDE SIDLLRMCRN IKEKDPNFKY 240 DFSLDSNNRL ENIAWSYASS IQSYDVFGDA VVFDTTHRLT AFDMPLGIWV GVNNYGMPCF 300 FGCVLLREET LRSYSWSLKA FLAFMNGKAP QTVLTDQNMC LKEAITLEMP STKHALCIWL 360 IVSKFPSWFN AVLGVRYNDW KAEFHRLYNL ESVEDFELGW RDMVNSFGLH TNRHIASLFA 420 LRSLWALPYL RSHVFAGMTT AGHSKSINAF IQRFLSAQTR LAHFVEQVAV TVDFKDQAGE 480 QQTMQQNLQN ICLKTGAPME AHAATVLTPF AFSKLQEQLV LAAHYASFQT EDSFLVRHHT 540 KLEGGRKVYW VPREGIISCS CHQFEFSGIL CRHALRVLST GNCFQIPDRY LPHRWRRIST 600 PSTKSLQNTH NDHTERVQLL QSMVSTLVTE SAKSRERLEI ATENVSILLS RIREQPICSQ 660 GVRELS

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MMVLYGDSSD QRSLSLDDTS STEESPDQTR LSLETTNDAV PYIGQRFPTH DAAYEFYAEF  60
ARGCGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPVKA ANDNKPQRNR KSSRCGCQAY  120
MRISKTTDLG VPEWRVTGFM NHHNHELLEP NQVRFLPAYR SISDSDKSRI LMFAKTGISV  180
QQMMRLMELE KGVEPGFLPF TEKDVRNLLQ SFRKVDPEDE SIDLLRMCRN IKEKDPNFKY  240
DFSLDSNNRL ENIAWSYASS IQSYDVFGDA VVFDTTHRLT AFDMPLGIWV GVNNYGMPCF  300
FGCVLLREET LRSYSWSLKA FLAFMNGKAP QTVLTDQNMC LKEAITLEMP STKHALCIWL  360
IVSKFPSWFN AVLGVRYNDW KAEFHRLYNL ESVEDFELGW RDMVNSFGLH TNRHIASLFA  420
LRSLWALPYL RSHVFAGMTT AGHSKSINAF IQRFLSAQTR LAHFVEQVAV TVDFKDQAGE  480
QQTMQQNLQN ICLKTGAPME AHAATVLTPF AFSKLQEQLV LAAHYASFQT EDSFLVRHHT  540
KLEGGRKVYW VPREGIISCS CHQFEFSGIL CRHALRVLST GNCFQIPDRY LPHRWRRIST  600
PSTKSLQNTH NDHTERVQLL QSMVSTLVTE SAKSRERLEI ATENVSILLS RIREQPICSQ  660
GVRELS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein

Link Out ? help Back to Top
Ensembl	OIT33671