PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT33499 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 215aa MW: 24351.9 Da PI: 4.9495 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.4 | 7.9e-11 | 47 | 92 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +ErrRR+++ +++ eLr+l+P+ + ++K +i + A+ YI++Lq OIT33499 47 NLDAERRRRQKLSERLLELRSLVPNI-----TNMTKETIITDAITYIRELQ 92 5579*********************6.....58*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence |
MIIKCDKMEF PNAPYDDSNI SEGSKIGGKM DKRNQIEGEV KEYKSKNLDA ERRRRQKLSE 60 RLLELRSLVP NITNMTKETI ITDAITYIRE LQTNVNNLSE QLLEMEATHG EELETKSEEN 120 IDTAEEMANW GIEPEVQVAH IGTSKLWIKI VCQKKRGGFT KLMEAMNILG FDLNDTSVTA 180 SKGVFLVTSS VEVVRGGLID AHQIREILLE IIRGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G21330.1 | 7e-36 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT33499 |