PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT33467 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NF-YB | ||||||||
Protein Properties | Length: 213aa MW: 23811.7 Da PI: 4.9643 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 169.8 | 3.1e-53 | 34 | 127 | 2 | 95 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 reqdrf+Pianv+rim+++lP +akis+d+ket+qecvsefisf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre++g OIT33467 34 REQDRFMPIANVIRIMRRILPPHAKISDDSKETIQECVSEFISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYREFDG 127 89*****************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MSMGLSAHLN QAIAANTNNS ATNNSEQDSE CTIREQDRFM PIANVIRIMR RILPPHAKIS 60 DDSKETIQEC VSEFISFITG EANERCQREQ RKTITAEDVL WAMSKLGFDD YIEPLTLYLH 120 RYREFDGGER GSLRGEPLLM KRPMIDPASA SMTPMAPYQL PPFSIAHHHG YFAYPPPMGN 180 GYMQRDASNG SSSHGAVATV ENDVESLAEE GKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 1e-68 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT33467 |