PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT33444 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | C2H2 | ||||||||
Protein Properties | Length: 172aa MW: 19273.6 Da PI: 10.5244 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00038 | 38 | 60 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H +H OIT33444 38 FECKTCNKRFPSFQALGGHRASH 60 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 13 | 0.0003 | 82 | 104 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ Fs L H+r+H OIT33444 82 HVCSICSMEFSLGQALGGHMRRH 104 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MIAMKRSRED DTKVEAEAMA NCLMFYSRLN NKTSSNEFEC KTCNKRFPSF QALGGHRASH 60 KRPKLLAGAG DFLVQSKKNK MHVCSICSME FSLGQALGGH MRRHRDEINK TSTAAGKLII 120 PVTGKKMIPV LKKSNSSKRI FCVDLNLSPH ENVDLKLWPT APVSSPVLRC FF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 2e-41 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT33444 |