PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33182
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 270aa    MW: 29784.6 Da    PI: 7.7609
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33182genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.52.9e-382887261
    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
              + +a+kcprCds ntkfCyynny+lsqPr+fC++CrryWtkGG lrnvPvGgg+rk+k+s
  OIT33182 28 QPQAVKCPRCDSLNTKFCYYNNYNLSQPRHFCQSCRRYWTKGGILRNVPVGGGCRKSKRS 87
              56899****************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MQDIHSIGGG GGRFYGGSGS DRRLRLNQPQ AVKCPRCDSL NTKFCYYNNY NLSQPRHFCQ  60
SCRRYWTKGG ILRNVPVGGG CRKSKRSKPK PSAVSTTDDT CQESKSNSNS NSKSNSNSGS  120
ESSSLTAITS TATAANTSVA MTPEVVLCNS SNPTLPDVQD SRFLVTETTK GDFIDEQVVG  180
HTTEEQIFHD IGAYPINANN ISMYQNSNAG FFDRTAHVEL SGRRANDGGL APVDWQTGGL  240
FGMMENSDHH YSYWYQRQWG ENDHSFNYLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.14e-32Dof family protein