PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT32793 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 258aa MW: 30450.3 Da PI: 8.5723 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.4 | 1.9e-19 | 35 | 82 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+++G g+W+++ar g++R +k+c++rw +yl OIT32793 35 KGPWTAEEDRLLIEYVNLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 82 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 88 | 132 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+++++++++ +G++ W+tIar ++ gRt++++k++w+++ OIT32793 88 RGQITPYEEKIILELHAIWGNR-WSTIARGLP-GRTDNEIKNYWRTH 132 6788999***************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 258 aa Download sequence |
MLLLSRQCTD RYTCRSKMTA EQMGNWGVIE EEWRKGPWTA EEDRLLIEYV NLHGEGRWNS 60 VARLAGLKRN GKSCRLRWVN YLRPDLKRGQ ITPYEEKIIL ELHAIWGNRW STIARGLPGR 120 TDNEIKNYWR THFKKSSTDK SQKTKARLLK RQLFQQQQQQ LNNQNDIKRL VLLFEENENN 180 NEVPNLSQEK QEMAFLYQNT AEQEQGGGFF YSTEASSKYE DIMWDYGLWN LDDFNANLNI 240 GAYNNSLPCM QTLATPFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24310.1 | 5e-68 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT32793 |