PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32769
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 200aa    MW: 22966.7 Da    PI: 9.7056
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32769genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08108148954
               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                r RR++i +++  L++l+P       +K++ a++L +Av+Y+k L
  OIT32769 108 ARHRREKISERIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 148
               699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MELYDITQSM KNIEMTQLLP NHNSNYMMTT SAHSLSFMPN SIDEHNAPHL LSMHDETLDI  60
EKRSSMDAMR EMIFRMAMMQ PIHIDPESVK PPKRKNVKIS KDPQSVAARH RREKISERIR  120
ILQRLVPGGT KMDTASMLDE AVHYVKFLKK QLKSLEQAAV NRPMITGFST TLMAQPVDYL  180
SSFRSCQTSH LMSSNVQMLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-49bHLH family protein