PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT32769

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 200aa MW: 22966.7 Da PI: 9.7056

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32769	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.4	1.2e-08	108	148	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR++i +++ L++l+P +K++ a++L +Av+Y+k L OIT32769 108 ARHRREKISERIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 148 699***************87.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MELYDITQSM KNIEMTQLLP NHNSNYMMTT SAHSLSFMPN SIDEHNAPHL LSMHDETLDI 60 EKRSSMDAMR EMIFRMAMMQ PIHIDPESVK PPKRKNVKIS KDPQSVAARH RREKISERIR 120 ILQRLVPGGT KMDTASMLDE AVHYVKFLKK QLKSLEQAAV NRPMITGFST TLMAQPVDYL 180 SSFRSCQTSH LMSSNVQMLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50330.1	2e-49	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIT32769