PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT32549

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 489aa MW: 54215.1 Da PI: 6.0364

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32549	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.8	8.8e-37	142	201	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+st+tkfCyynn +++qPr+fC++C+ryWt+GG++rn+PvG+grrknk+ OIT32549 142 PDKILPCPRCNSTDTKFCYYNNNNVNQPRHFCRSCQRYWTAGGTMRNLPVGAGRRKNKNL 201 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MTCDSEIKLF GKILPMVVSG EYSGIGRSTI DNRSSTGFDV DQYLEDNRTS SSENDEGSES 60 IDYENQAADK DDIHITRELS EDKLEEEDQN QMMEISENPK TSSGSEKSTK SPTDEDHQTV 120 RSSETENEPN TTDSQQTLLK KPDKILPCPR CNSTDTKFCY YNNNNVNQPR HFCRSCQRYW 180 TAGGTMRNLP VGAGRRKNKN LASHYHHISI PDDVLLASRI ESPNGFHHPM FKPNGTVLSF 240 GPELPLCDSM ASALNPAERR APNVIPNGFY KQEHRNSSCK GGENGVDCSK GSSIKTSSMM 300 VEGGNIKPHE AVMRNTNGFP SPAPCLHGVP FPFPWNAAVP MSAIYPFGFP MPFYPAPYWN 360 CSVPPWTNPW LSQPSRTENE KVSGSDPNSP LGKHSREGDD PEGKEPVEQK SSKRSILVPK 420 TLRIDDPDEA AKSSIWSTLG IKYDSASRGG FFKALQPKID DKDHKDTTSP VLHANPAALS 480 RSLVLQERT

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MTCDSEIKLF GKILPMVVSG EYSGIGRSTI DNRSSTGFDV DQYLEDNRTS SSENDEGSES  60
IDYENQAADK DDIHITRELS EDKLEEEDQN QMMEISENPK TSSGSEKSTK SPTDEDHQTV  120
RSSETENEPN TTDSQQTLLK KPDKILPCPR CNSTDTKFCY YNNNNVNQPR HFCRSCQRYW  180
TAGGTMRNLP VGAGRRKNKN LASHYHHISI PDDVLLASRI ESPNGFHHPM FKPNGTVLSF  240
GPELPLCDSM ASALNPAERR APNVIPNGFY KQEHRNSSCK GGENGVDCSK GSSIKTSSMM  300
VEGGNIKPHE AVMRNTNGFP SPAPCLHGVP FPFPWNAAVP MSAIYPFGFP MPFYPAPYWN  360
CSVPPWTNPW LSQPSRTENE KVSGSDPNSP LGKHSREGDD PEGKEPVEQK SSKRSILVPK  420
TLRIDDPDEA AKSSIWSTLG IKYDSASRGG FFKALQPKID DKDHKDTTSP VLHANPAALS  480
RSLVLQERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-80	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT32549