PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32475
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 343aa    MW: 37632.8 Da    PI: 5.8919
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32475genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.5e-09186233455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++sLq
  OIT32475 186 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 233
               8*************************9....89999***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MESTQVRSAS CGGKAGETAT GFHHIGGEGQ SIIMPVPTEA AGNSFTALLE LPPNQALDLL  60
VHSDEMGSAK LSLRDTHNKP SYSSSLIDRA SAGEFSVFAA GNSPENGSFL PDSQFVKIEP  120
VDSDSNPNSS PEFSNPTFDQ KTTKRKERQK KGKESSSKKS KKSENDTSEK LPYVHVRAAR  180
GQATDSHSLA ERARREKINA RMKLLQELVP GCNKISGTAM VLDEIINHVQ SLQRQVEFLS  240
MRLAAVNPRV DFNLDSLFAA EQSGSMVDSN FAGIVAPLIW PEGQSSRNRN QYQQLLQIDE  300
FNQSVWVREE DNSSFITPEN SLLTYDSSAN SASLHQNQLK MEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.13e-68bHLH family protein