PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32299
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 351aa    MW: 39568 Da    PI: 4.54
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32299genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-1756104355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  OIT32299  56 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 104
               56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MSSSSTPSSE NINQLPFGMF EPIRTPTGYS WLQRNTAICQ PSEKRGRRKQ AEPGRFLGVR  60
RRPWGRYAAE IRDPTTKERH WLGTFDTAQE AALAYDRAAL SMKGTQARTN FIYTCDNNNS  120
FPSLISPFDN VQNFLQPNSH FNFKNATTQN NNKNVITTTT SDNETSNNSH DSYSSSPNEN  180
NSFFLTPSHE NSGYLDCIVP DSCLKPPSSS TPQSKMIIKN SQENSNIDDH HQDYMNTFPD  240
NPSNFSFNSG FWDGDDQEKY TSSWENSCEL SAMMINNNIM SSSTETNGNN IDINEMVDVA  300
NCYYPNMEIN AAFDHDNMMV QPSEITTTTA TTTSSSIFQP FSDVEFGYSL F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-54ERF family protein