PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT32108

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 641aa MW: 70988 Da PI: 4.6846

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32108	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.5	1.1e-52	28	156	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lp+G+rF+Ptdeelv++yL+ k++g + e+ +vi+evdi+k+ePwdLp + v+++++ew+fF+++d+ky++g+r nrat++gyWkatgkd+++ +kkg++ OIT32108 28 LPVGYRFRPTDEELVNHYLRLKINGADSEV-SVIREVDICKLEPWDLPdMsVVESNDNEWFFFCPKDRKYQNGQRLNRATERGYWKATGKDRNIATKKGAK 127 799**********************999.99**********96347788999*************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLv+y grap+g++t+Wv+heyr+ OIT32108 128 IGMKKTLVYYIGRAPEGKRTHWVIHEYRA 156 *************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MMAVLPGDNV IAVLPVDKQM GIPPLNTLPV GYRFRPTDEE LVNHYLRLKI NGADSEVSVI 60 REVDICKLEP WDLPDMSVVE SNDNEWFFFC PKDRKYQNGQ RLNRATERGY WKATGKDRNI 120 ATKKGAKIGM KKTLVYYIGR APEGKRTHWV IHEYRATDKS LDGSHPGQGA FVLCRLFKKN 180 DLKQDEHVES SNLDDAELNA TVAKSPTEGD LSEAATPLAV IQAFSDSDKS YAAKLPKGEM 240 YGKQLPIESH SNSCIADDTE DQMLDITSIP PDMELEKALG NFCDPSMQPL DWKIFSPLHS 300 QLQVELGSSY LQTPMNNGIG AYQKDVQFQY GTNAFDINEF LDSVIINSDE FSCEDSGQEL 360 ASHRFDAQFC GLPGAPIKDS GSCSESEAEV TQRLVEPDFF EPEVLLGNFD RETAVKREVN 420 SIGATVQEAR GSAPYVRHDH AMGNLDFFQH SYPGQNVYPA GYGAIQVPNF PSVEQSGGYS 480 NVVSSDSGSG TGIKLRPRQM QNQSDDRQFR TQGTANRRIR LQVKLQVGPV ESRSHTDSSQ 540 GPESHQAVTE AEKASDEHSS STSDETRDTT CGEYGVSGEA DDLSTPVKDA YDSPVQDTAD 600 VSLKTTTKLS SSSRLYMSMV LVVVSLLVVF VGVWEYFRVR V

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MMAVLPGDNV IAVLPVDKQM GIPPLNTLPV GYRFRPTDEE LVNHYLRLKI NGADSEVSVI  60
REVDICKLEP WDLPDMSVVE SNDNEWFFFC PKDRKYQNGQ RLNRATERGY WKATGKDRNI  120
ATKKGAKIGM KKTLVYYIGR APEGKRTHWV IHEYRATDKS LDGSHPGQGA FVLCRLFKKN  180
DLKQDEHVES SNLDDAELNA TVAKSPTEGD LSEAATPLAV IQAFSDSDKS YAAKLPKGEM  240
YGKQLPIESH SNSCIADDTE DQMLDITSIP PDMELEKALG NFCDPSMQPL DWKIFSPLHS  300
QLQVELGSSY LQTPMNNGIG AYQKDVQFQY GTNAFDINEF LDSVIINSDE FSCEDSGQEL  360
ASHRFDAQFC GLPGAPIKDS GSCSESEAEV TQRLVEPDFF EPEVLLGNFD RETAVKREVN  420
SIGATVQEAR GSAPYVRHDH AMGNLDFFQH SYPGQNVYPA GYGAIQVPNF PSVEQSGGYS  480
NVVSSDSGSG TGIKLRPRQM QNQSDDRQFR TQGTANRRIR LQVKLQVGPV ESRSHTDSSQ  540
GPESHQAVTE AEKASDEHSS STSDETRDTT CGEYGVSGEA DDLSTPVKDA YDSPVQDTAD  600
VSLKTTTKLS SSSRLYMSMV LVVVSLLVVF VGVWEYFRVR V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	3e-86	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT32108