PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT32071

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 363aa MW: 41872.7 Da PI: 4.8157

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32071	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.4	3.9e-55	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +ppGfrFhPtdeelv +yL+kk++++k++l +vi+++d+y++ePwdL+ k ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k + OIT32071 8 VPPGFRFHPTDEELVGYYLRKKIASQKIDL-DVIRDIDLYRIEPWDLRdKcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-KLK 106 69**************************.9***********843432233667**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 l+g++ktLvfykgrap+g+ktdW+mheyrle OIT32071 107 LIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 137 ***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDTNESCVPP GFRFHPTDEE LVGYYLRKKI ASQKIDLDVI RDIDLYRIEP WDLRDKCRIG 60 YEEQNEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VYDKLKLIGM RKTLVFYKGR 120 APNGQKTDWI MHEYRLESDE NGPPQEEGWV VCRAFKKKIT GQTKTNMGEG WESNYFYEEP 180 STAVSSIVDP LEYITRQPPP PNFMAQNLLC KQEMELAENN NLNFAYSNNS DQFVQLPQLE 240 SPSLPFIKRP ISSMSLVSEN SNQEDDEQTI NKRCSTSKNV TGDWRALDKF VASQLSHDNH 300 EQEKSTYEAD HGLLSGLDQE EAHNYSDLGM LLLLSERTEG PKLNEILSSS SDDFDTGVCI 360 FDK

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDTNESCVPP GFRFHPTDEE LVGYYLRKKI ASQKIDLDVI RDIDLYRIEP WDLRDKCRIG  60
YEEQNEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VYDKLKLIGM RKTLVFYKGR  120
APNGQKTDWI MHEYRLESDE NGPPQEEGWV VCRAFKKKIT GQTKTNMGEG WESNYFYEEP  180
STAVSSIVDP LEYITRQPPP PNFMAQNLLC KQEMELAENN NLNFAYSNNS DQFVQLPQLE  240
SPSLPFIKRP ISSMSLVSEN SNQEDDEQTI NKRCSTSKNV TGDWRALDKF VASQLSHDNH  300
EQEKSTYEAD HGLLSGLDQE EAHNYSDLGM LLLLSERTEG PKLNEILSSS SDDFDTGVCI  360
FDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-156	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT32071