PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31970
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 335aa    MW: 36465.9 Da    PI: 7.6968
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31970genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15.1e-18242275134
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
               C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  OIT31970 242 CMHCEITKTPQWRAGPLGPKTLCNACGVRYKSGR 275
               99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGSNLVDEID CGSFFDQIDD LIEFPSENEC GGFSSTDCKE FPSIWDQPSD PLFSGSYNNS  60
PSDLSAELSV PYEDIVQLEW LSTFVEDSFS AGGLTLGKEN APINKETSHS KFQSSSPVSV  120
LESSSSSSSS SSCSGGKTIP LSPCHRGPQR ARSKRPRPAT FNPRPAIQLI SPTSVFIENP  180
RPFVAPVTSS ESGNFAQSPM KKIPRPAATA AEQKTKKKIK FTIPLAPIET NQNSSAHAVR  240
RCMHCEITKT PQWRAGPLGP KTLCNACGVR YKSGRLFPEY RPAASPTFVP SMHSNSHKKV  300
LEMRTKDIPE NNATARTQIP ATITEQAFSK SSVEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154158KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-40GATA family protein