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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT31804 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 27303.3 Da PI: 5.1941 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.3 | 4.2e-06 | 183 | 227 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + n E++RR ++++ L+ ++P + +++ +++L +Av+Y+ksL OIT31804 183 TSNCSEKKRR-KLKKMVKALKGIVPGS-----SRMNTVSVLDEAVRYLKSL 227 5689999998.7*************97.....7****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MQSNYQFSPQ KPFFSPEDQA GGGNLLDIPS PSVFGTMALP TGFNPSVPVH GFEFQSSEAC 60 PKNFIIFDQT DYRSQIMFHP AMASKFPYPD LNFNATYFQD SMERKVANNE NTEVSSYLKE 120 DSADINALLS FEEEEHEEYD DEEVSTARTD ANYGNSSPES YSNYDCQSKK SRTTSFRKSS 180 GSTSNCSEKK RRKLKKMVKA LKGIVPGSSR MNTVSVLDEA VRYLKSLKVE VQKLGVENLK 240 TFA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 193 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 1e-29 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT31804 |