PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31791
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 214aa    MW: 24659.9 Da    PI: 10.3949
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31791genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR164.62.8e-2048133290
      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
               +Y+eYA ++GF +r+ +s+ks+r+g+i++r + C     ++++ +    ++++r   r gC+a++ vk+ek g w+v k++ +HnH+l+
  OIT31791  48 YYDEYAGRAGFITRVLSSRKSERDGSIISRGLGCRGVPDNQRSGSF---TNQKRDRRRDGCTAMILVKREKPGMWVVRKFVRDHNHPLV 133
               8*********************************876666666655...88888999******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDVQISEDNG ARRVESSAVG QVSTSEADRT QEPYDGMTFD SEEAVRAYYD EYAGRAGFIT  60
RVLSSRKSER DGSIISRGLG CRGVPDNQRS GSFTNQKRDR RRDGCTAMIL VKREKPGMWV  120
VRKFVRDHNH PLVISPSKRR PTFDEKDKRI QELTAELRIK KRLSAAYREQ LLSLMKDVDS  180
HSEHMCTKVQ AVRRILKELE AKRKELSNHS RHHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-55FAR1 family protein