PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31495
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 409aa    MW: 44946.2 Da    PI: 7.5964
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31495genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.7e-12337382655
               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +++Er RR ri +++ +L++l P+     +k  + a++L +Av+YIk+Lq
  OIT31495 337 SIAERMRRTRISERMKKLQDLFPNM----DKQTNTADMLDLAVDYIKDLQ 382
               689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MFSSTEPMSR ETDKFNSFLF SSGGGGGSSN FKNGGELQGM ETEFLRNKEI MISDFFQQQS  60
SQFHQQQSNN NGGGLTRYRS APSSFFAGIL DGDGNNSGEN FITHDGSSSS DSESMFTALL  120
NNNNDNNNVN NNNNVTVSGT RDLNDQISKN QLQFASSSMK QEIGEDIKFA SSAMGSYGVG  180
VQMQSGVRLS NGNGGGSNNL IRQSSSPAGF FNGFDITREV GNYRASSGAN MSFSSAQSST  240
SNFMPSIAEN ESWNDSSFHS LKRNRDGDLK VFSNDFNGIT SQNGESRNFT TSGLTHHLSL  300
PKTSSEMAAI EKYMQFQQDS VPCKIRAKRG FATHPRSIAE RMRRTRISER MKKLQDLFPN  360
MDKQTNTADM LDLAVDYIKD LQKQVQTLND KKAKCSCPSK QLQYSNGTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.14e-60bHLH family protein