PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT31454

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 300aa MW: 33930.2 Da PI: 6.5762

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT31454	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.8e-08	249	282	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + OIT31454 249 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 282 469*****************************87 PP
2	ELK	26.3	1.7e-09	203	224	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ OIT31454 203 ELKIELKQGFRSRIEDVREEIL 224 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MQEQGVGLMG SSSGGGIGSL GPLGDVSMVI SEDNQRQLKG EIATHPLYEQ LLSAHVACLR 60 VATPIDQLPL IEAQFSQSHH LLRSYASQHH SHSLSPHERQ ELDNFLAQYL LVLCSFKEQL 120 QQHVRVHAVE AVMACREIEQ NLQLLTGATL GEGSGATMSD DEDELQMDFS LDQSGGDAHD 180 LMGMGFGLPT ESERSLMERV RQELKIELKQ GFRSRIEDVR EEILRKRRAG KLPGDTTTVL 240 KNWWQQHSKW PYPTEDDKAK LVEETGLQLK QINNWFINQR KRNWHSNSQS VTSLKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	300	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-168	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT31454