PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT31129

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HB-other

Protein Properties

Length: 1778aa MW: 199802 Da PI: 5.3765

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT31129	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.8	1.6e-17	37	91	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k OIT31129 37 KRKMKTASQLEILENTYAVETYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 91 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1778 aa Download sequence
MELDSSAAAA ATATGGGSGS SDVEKKKLPE GGEPKVKRKM KTASQLEILE NTYAVETYPS 60 EALRAELSVK LGLSDRQLQM WFCHRRLKDR KATTPVKRQK KEASPVAMVD EMAVSGEIGK 120 EHAFGSGSRV SPLGLVDLQL QQQHHQQRVA HRPGTAVPRF RTEMQALKRY YEPPQAISEL 180 RAIAFVEAQL GQPLREDGPI LGMEFDPLPP GAFGAPIVAA MQHKPVGRPF EAQIYEKPDV 240 NSIKGTTRTL HEYQFLPEQP SIRSNAYEQS VPSPYYSSIE VQSSRTMLST GRSFMHGSEQ 300 VASGYSIPGQ IPTLNLLPQG KQGHISPASA EADAVPQRSL VNIEVEANYG GQPMTALESP 360 FMARVIHDEE RLERKRKSEE ARIAREVEAH EKRIRKELEK QDMLRRKREE QIRKDMERQD 420 RERRKEEERL LREKLREEER YQREQKREME RREKFLQKES IKAEKMRLKE EMRREKEVAR 480 LKAANVRATA RRIAKESTEL IDDERLELME LAASKKGLPS ILSLDSENLQ NLEAFRDMLI 540 EFPPKSVCLR KPFGVEPWIC SEEDVGNILM VWRFLITFSD VLRLWPFTLD EFVQAFHDFD 600 PRLLAEIHIA LLKLIIKDIE DVARTPASAV GANPNSGANP GGGHPEIVEG AYAWGFDIRS 660 WQSHLNALTW PEILRQFALC AGFGPKLKKQ SVGPAYPRDE NEGNDGADII SNLRSGVAAE 720 KAVAKLQERG FSNPRRSRHR LTPGTVKFAA FHILSLEGSK GLNILEVAEK IQKSGLRDLT 780 TSKTPEASIS AALSRDTKLF ERTAPSTYCL RDPYRKDPAD ADAILSAARE KIRVFKNECV 840 NGEEAEDVEK EVERDDESES DAADDPEVDD LVSELKFVET PQSHKTDRTD GTNSTEDVSE 900 ILRFDLTQTP GDVSLQNSTG IMHSESFGEL KPIGTSGSQS AAIGADSSNL NQEDAVIDES 960 NAGQKWVQGL TEGEYSDLTV EERLDALVAL IGVANEGNSI RLVLEERLEA ASALKKQIWA 1020 EAQLDKRRFK EEFLLKVQYP SVSNNAEQFC SVTSREARQS PLLAVDGHNE VAAIRSLQQE 1080 AMHKLPDESN NSSNVAVEKA CPMQEIYGDQ DNSQFQHFAY VAEKSRSQLK AYIGHRAEET 1140 FVYRSLPLGQ DRRRNRYWQF ITSPSRNDPG SGRIFVELRD GRWRLIDSEK DFNALMASLD 1200 VRGIRESHLH SMLQNIEATF KETSRRYLCT EAKVANPVKA DTSETVPSND CCSKTGSPKS 1260 TICISNCETP EPSTSFLIGI GRNKMENSDA LSRYAHLEKW MWEDCVNTQF LCARKYGKIR 1320 CEKLISICNN CHDTYFLEDN HCHCCHTTFS LAKTSCFMEH VAQCKDKLED LFRPLISDSA 1380 PPLRIRLLRA QLASMEACIP PEALEPVWSE VYRRSWGLKL HIASAAGDLL QILTLLEGAI 1440 KREYLMLDYE TTTELLGAVS NSNLDRMAVL PWVPHTTAAV ALRLMELDSS LCYTQQQKAD 1500 SLKERESANS ITLKTNYADM KRVAGIISAE APLEYENLEP DFSVKVGGRH VNSGQGRNHV 1560 RGGAHSRVGG GRSQRKLSAS KSESAQRTST KNSGRFDHLP AWQSRDRGKA RRKRGRRSVR 1620 NRQKPVKNVE NAAIEKVTIP IQQKWKEDEE TAAAQFEAPD NDSDPGTSGS EDDNGQATAD 1680 DYEDLIADNY GVLRDKTDHA SNIVKYSVGE HYIEPADGDD VDDYEDDRDE EDEEEGLADE 1740 NVQRYFDAES EEEGNRFMDA ELVENPNKDS ESSSEYSD

Sequence ? help Back to Top

Protein Sequence Length: 1778 aa Download sequence

MELDSSAAAA ATATGGGSGS SDVEKKKLPE GGEPKVKRKM KTASQLEILE NTYAVETYPS  60
EALRAELSVK LGLSDRQLQM WFCHRRLKDR KATTPVKRQK KEASPVAMVD EMAVSGEIGK  120
EHAFGSGSRV SPLGLVDLQL QQQHHQQRVA HRPGTAVPRF RTEMQALKRY YEPPQAISEL  180
RAIAFVEAQL GQPLREDGPI LGMEFDPLPP GAFGAPIVAA MQHKPVGRPF EAQIYEKPDV  240
NSIKGTTRTL HEYQFLPEQP SIRSNAYEQS VPSPYYSSIE VQSSRTMLST GRSFMHGSEQ  300
VASGYSIPGQ IPTLNLLPQG KQGHISPASA EADAVPQRSL VNIEVEANYG GQPMTALESP  360
FMARVIHDEE RLERKRKSEE ARIAREVEAH EKRIRKELEK QDMLRRKREE QIRKDMERQD  420
RERRKEEERL LREKLREEER YQREQKREME RREKFLQKES IKAEKMRLKE EMRREKEVAR  480
LKAANVRATA RRIAKESTEL IDDERLELME LAASKKGLPS ILSLDSENLQ NLEAFRDMLI  540
EFPPKSVCLR KPFGVEPWIC SEEDVGNILM VWRFLITFSD VLRLWPFTLD EFVQAFHDFD  600
PRLLAEIHIA LLKLIIKDIE DVARTPASAV GANPNSGANP GGGHPEIVEG AYAWGFDIRS  660
WQSHLNALTW PEILRQFALC AGFGPKLKKQ SVGPAYPRDE NEGNDGADII SNLRSGVAAE  720
KAVAKLQERG FSNPRRSRHR LTPGTVKFAA FHILSLEGSK GLNILEVAEK IQKSGLRDLT  780
TSKTPEASIS AALSRDTKLF ERTAPSTYCL RDPYRKDPAD ADAILSAARE KIRVFKNECV  840
NGEEAEDVEK EVERDDESES DAADDPEVDD LVSELKFVET PQSHKTDRTD GTNSTEDVSE  900
ILRFDLTQTP GDVSLQNSTG IMHSESFGEL KPIGTSGSQS AAIGADSSNL NQEDAVIDES  960
NAGQKWVQGL TEGEYSDLTV EERLDALVAL IGVANEGNSI RLVLEERLEA ASALKKQIWA  1020
EAQLDKRRFK EEFLLKVQYP SVSNNAEQFC SVTSREARQS PLLAVDGHNE VAAIRSLQQE  1080
AMHKLPDESN NSSNVAVEKA CPMQEIYGDQ DNSQFQHFAY VAEKSRSQLK AYIGHRAEET  1140
FVYRSLPLGQ DRRRNRYWQF ITSPSRNDPG SGRIFVELRD GRWRLIDSEK DFNALMASLD  1200
VRGIRESHLH SMLQNIEATF KETSRRYLCT EAKVANPVKA DTSETVPSND CCSKTGSPKS  1260
TICISNCETP EPSTSFLIGI GRNKMENSDA LSRYAHLEKW MWEDCVNTQF LCARKYGKIR  1320
CEKLISICNN CHDTYFLEDN HCHCCHTTFS LAKTSCFMEH VAQCKDKLED LFRPLISDSA  1380
PPLRIRLLRA QLASMEACIP PEALEPVWSE VYRRSWGLKL HIASAAGDLL QILTLLEGAI  1440
KREYLMLDYE TTTELLGAVS NSNLDRMAVL PWVPHTTAAV ALRLMELDSS LCYTQQQKAD  1500
SLKERESANS ITLKTNYADM KRVAGIISAE APLEYENLEP DFSVKVGGRH VNSGQGRNHV  1560
RGGAHSRVGG GRSQRKLSAS KSESAQRTST KNSGRFDHLP AWQSRDRGKA RRKRGRRSVR  1620
NRQKPVKNVE NAAIEKVTIP IQQKWKEDEE TAAAQFEAPD NDSDPGTSGS EDDNGQATAD  1680
DYEDLIADNY GVLRDKTDHA SNIVKYSVGE HYIEPADGDD VDDYEDDRDE EDEEEGLADE  1740
NVQRYFDAES EEEGNRFMDA ELVENPNKDS ESSSEYSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	OIT31129