PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT30919 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HB-other | ||||||||
Protein Properties | Length: 260aa MW: 29309.4 Da PI: 8.2207 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 17.2 | 8.8e-06 | 103 | 133 | 3 | 33 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeL 33 k ++t eq+e+Le+l++++++ps + ++L OIT30919 103 KYVRYTLEQVEALERLYHECPKPSSLRHQQL 133 67899********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MTSDQKNKHV CSAKSEAEMK LRRHETYRLI FAGKKEALLL QRRTKRQESK KRYLSDNDGF 60 HGTTEAAFEF QQQIVPLVGS SATVMMAVTS ACKDSKMGMD NEKYVRYTLE QVEALERLYH 120 ECPKPSSLRH QQLIRESLTT TDNNSCESVV TSGQQNLSAH RPPRDASPAG FLSLAEETLT 180 EFLSNATGTV MKWVQMPEMK VYWQGFSMDV HKIVQVDLKF PTKAIVSAVA KDFIDACKDS 240 TLEKVLGHTW IVQNADPSGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32880.1 | 1e-21 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT30919 |