PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30106
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family VOZ
Protein Properties Length: 476aa    MW: 52959.6 Da    PI: 5.8959
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30106genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ426.44.3e-1311964151217
       VOZ   1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 
               pppsaflgpkc+lwdc+rpa gs+w+q   dycs fha+la neg pgt pv+rp gi+lkd+llf+alsak+qgk+vgipecegaatakspwna+elfdl
  OIT30106 196 PPPSAFLGPKCSLWDCPRPAMGSDWCQkshDYCSDFHASLAPNEGYPGTPPVVRPMGIGLKDNLLFQALSAKAQGKDVGIPECEGAATAKSPWNAPELFDL 296
               89***********************976668********************************************************************** PP

       VOZ  99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgk 199
               +++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++++ewhlyeyein++da+alyrlelklvd+kks+kgk
  OIT30106 297 KVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPMKNLEWHLYEYEINKYDACALYRLELKLVDGKKSPKGK 397
               ***************************************************************************************************** PP

       VOZ 200 vskdsladlqkklgrlta 217
               v+k+s+adlqk++grlta
  OIT30106 398 VTKESVADLQKQMGRLTA 415
               ****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MGKGSKSGAG KSASHQLFKD KAKNRVDDLQ GVFTNLQSAR KESRTYDVGV LEEQVHQMLR  60
EWKAELNEPS PASSLQGGSR VSSDIYRLLL GEEEDDATSL LAAPKPEPDA QKNDVAGFQE  120
GFNVTPVMQE QGYQLVDQCR SMPLVVNNAG INNLGIATQQ DYNSFDLQQD FDQYFPGFDA  180
LNLCLEDVLP PVHISPPPSA FLGPKCSLWD CPRPAMGSDW CQKSHDYCSD FHASLAPNEG  240
YPGTPPVVRP MGIGLKDNLL FQALSAKAQG KDVGIPECEG AATAKSPWNA PELFDLKVVE  300
GETIREWLFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK QVMNEYGGLK RSYYMDPQPM  360
KNLEWHLYEY EINKYDACAL YRLELKLVDG KKSPKGKVTK ESVADLQKQM GRLTAEFPLD  420
NKRSVKGRAK ANSKDVAVNI HAVPNRIVPA SEGFDHGTAA PFPDYLVDNL GGYYVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0VOZ family protein