PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OIT30033

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 344aa MW: 38241.9 Da PI: 7.6569

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30033	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.5	7.8e-51	13	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhP+deel+++yL kkv+g+ + + evd++k+ePw++p+ + + kewyf+s+rd+kyatg r+nrat sgyWkatgkd++ OIT30033 13 LPPGFRFHPRDEELICDYLMKKVAGSGsgsgseS---DrhypLLIEVDLNKSEPWEIPEVACVGGKEWYFYSQRDRKYATGLRTNRATISGYWKATGKDRA 110 79********************9997776542...13443599*********7666789******************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++k++ lvg++ktLvfy+grapkg+ktdWvmhe+rl OIT30033 111 IMRKGSCLVGMRKTLVFYQGRAPKGRKTDWVMHEFRL 147 *********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSSSSLSMVE SKLPPGFRFH PRDEELICDY LMKKVAGSGS GSGSESDRHY PLLIEVDLNK 60 SEPWEIPEVA CVGGKEWYFY SQRDRKYATG LRTNRATISG YWKATGKDRA IMRKGSCLVG 120 MRKTLVFYQG RAPKGRKTDW VMHEFRLQTT PPHISSLKED WVLCRVFHKN KELIATKQGT 180 GSTIYHEHDT ISSSSLPPLM DPYITFDQTQ PNNININTTN MNELYYEQVP CFSIFNPNQT 240 FSSHSHHLPT TATAGATDAY GGLPADIGTY LNAAATSSSC DNKVIKAVLS HLNIMEGSHN 300 NINNPAHNIV NIKAGGSPTS FGEGSSETSF LSEVGLTTMW NNHY

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSSSSLSMVE SKLPPGFRFH PRDEELICDY LMKKVAGSGS GSGSESDRHY PLLIEVDLNK  60
SEPWEIPEVA CVGGKEWYFY SQRDRKYATG LRTNRATISG YWKATGKDRA IMRKGSCLVG  120
MRKTLVFYQG RAPKGRKTDW VMHEFRLQTT PPHISSLKED WVLCRVFHKN KELIATKQGT  180
GSTIYHEHDT ISSSSLPPLM DPYITFDQTQ PNNININTTN MNELYYEQVP CFSIFNPNQT  240
FSSHSHHLPT TATAGATDAY GGLPADIGTY LNAAATSSSC DNKVIKAVLS HLNIMEGSHN  300
NINNPAHNIV NIKAGGSPTS FGEGSSETSF LSEVGLTTMW NNHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT30033