PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30028

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 501aa MW: 55926.6 Da PI: 6.7265

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30028	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.4	4.3e-10	197	235	5	43
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 k rr+++NReAA++sR+RKka++++Le+ L++ + OIT30028 197 KTLRRLAQNREAAKKSRLRKKAYVQQLETSRIRLSQLEQ 235 7789************************86555555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MASQGIGETG LTNSGPSNHH NMPYAVFRGL TPATTSFMYH STPNNQEGSF DFGELEEAFA 60 LQGFKINNDE AKASLYAVST GKPAATLDMF PSWPMRFQDT LKENSKSREE DISTDSGSFS 120 SRAQAHLEPE SPISTKASSE QNQLQLTQQQ QQQLHQQMSS DNNPRTGNLQ TELASKPNNM 180 EKRKGAGSTS ERMADPKTLR RLAQNREAAK KSRLRKKAYV QQLETSRIRL SQLEQELQRA 240 RSQGIFLGGG TAAGANISSG AALFDMEYSR WLDDDHRHMS ELRTALQAHL SDGDLRLIVD 300 GYIAHYDEIF SLKGVAAKSD VFHLITGMWT TPAERCFLWM GGFRPSELIK MLIGQLDPLT 360 EQQLMGIYSL QQSSQQAEDA LSQGLEQLQQ SLIDTVASGS INDGMHHMAL ALGKLSNLEG 420 FVRQADNLRQ QTLHQLHRIL TVRQAARCFL VIGEYYGRLR ALSSLWLSRP RETLIADDSS 480 CQTTTELQMV HSSQNHYFSN F

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MASQGIGETG LTNSGPSNHH NMPYAVFRGL TPATTSFMYH STPNNQEGSF DFGELEEAFA  60
LQGFKINNDE AKASLYAVST GKPAATLDMF PSWPMRFQDT LKENSKSREE DISTDSGSFS  120
SRAQAHLEPE SPISTKASSE QNQLQLTQQQ QQQLHQQMSS DNNPRTGNLQ TELASKPNNM  180
EKRKGAGSTS ERMADPKTLR RLAQNREAAK KSRLRKKAYV QQLETSRIRL SQLEQELQRA  240
RSQGIFLGGG TAAGANISSG AALFDMEYSR WLDDDHRHMS ELRTALQAHL SDGDLRLIVD  300
GYIAHYDEIF SLKGVAAKSD VFHLITGMWT TPAERCFLWM GGFRPSELIK MLIGQLDPLT  360
EQQLMGIYSL QQSSQQAEDA LSQGLEQLQQ SLIDTVASGS INDGMHHMAL ALGKLSNLEG  420
FVRQADNLRQ QTLHQLHRIL TVRQAARCFL VIGEYYGRLR ALSSLWLSRP RETLIADDSS  480
CQTTTELQMV HSSQNHYFSN F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIT30028