PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT29850 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 26276.7 Da PI: 8.1897 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.7e-19 | 102 | 152 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIr+p +ng +r++lg++ taeeAa a+++a+ +++g OIT29850 102 HYRGVRQRP-WGKFAAEIREPAKNG--ARVWLGTYETAEEAALAYDKAAYRMRG 152 7********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MYQPISTEFP VYHRTSSFSS LMPCLTDTWG DLPLKVDDSE DMVIYGFLSD ALTTGWTPYN 60 LTSTEIKAEP REEVEPATGP VTSVAPSAET TTAQAVVPKG RHYRGVRQRP WGKFAAEIRE 120 PAKNGARVWL GTYETAEEAA LAYDKAAYRM RGSKALLNFP HRIGLNEPEP VRLTVKRRSP 180 EPASSSISSA SENSLPKRRR KTVAAKQAEL EVQSRSNVMQ VGCQMEQFPV GEQLLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 2e-54 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT29850 |