PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT29672

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 318aa MW: 36354.4 Da PI: 7.8217

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT29672	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.1e-53	11	140	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +ppGfrFhPtdeel+++yLkkk++ +k+++ evi+evd++k+ePw+L++++k ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + + OIT29672 11 VPPGFRFHPTDEELLHYYLKKKLSFHKFDM-EVIREVDLNKMEPWELQERCKIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRN-PLK 109 69**************************.99**********964444222455*********************************9.888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 ++g++ktLvfy+grap+g+ktdW+mheyrle OIT29672 110 KIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 140 9**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MASSGGGGGG VPPGFRFHPT DEELLHYYLK KKLSFHKFDM EVIREVDLNK MEPWELQERC 60 KIGSTPQNEW YFFSHKDRKY PTGSRTNRAT NAGFWKATGR DKCIRNPLKK IGMRKTLVFY 120 RGRAPHGQKT DWIMHEYRLE DSDENSSEDG WVICRVFKKK NLFKVIANEG TTDTGSDHLL 180 NSSTSIHQPR TTFTHKDSPY LLQQHQQHGH DHGLNYSHIP TTVAATFPHE YNSHNNNIQL 240 AQNFMSLGYH HDFSSGPLPT SQQSAPCESG LEVASSHQNM NNDQWGIISE DANVASSSMN 300 QINHLPLRGE MDFWSYGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-101	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT29672