PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT29557 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | FAR1 | ||||||||
Protein Properties | Length: 260aa MW: 29262 Da PI: 5.8219 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 86.5 | 4e-27 | 91 | 177 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA+++GF +r+++ ++s rnge ++r++vC+keg++++++++ + +r+ r gCka++ vkke++gkw+v+kl++eHnH+l+ OIT29557 91 YYSTYATHLGFVMRVDAFRRSMRNGELVWRRLVCNKEGFSKSRQNQ--NGQRKCRAIREGCKAMIIVKKEQSGKWVVAKLVKEHNHPLV 177 8*****************************************9988..778888889******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDENNYATDD AEMVESSSGK GLTTNGVEAE GRLNMELYVV DENNTTADDG EMVLSSSGME 60 LTRNGVEAEG RPNLEPYVGM EFESEEAAKA YYSTYATHLG FVMRVDAFRR SMRNGELVWR 120 RLVCNKEGFS KSRQNQNGQR KCRAIREGCK AMIIVKKEQS GKWVVAKLVK EHNHPLVVKP 180 ANTRIGSILC QTPDDKDVKI RELTAELQKE RKRSAVLQEQ LDMVLKDMED HSDQLSKNIN 240 DIVKSVKELE SRKIVSPNGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 7e-84 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT29557 |