PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT29429 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 320aa MW: 36366.1 Da PI: 7.4193 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++q G+g +W + + ++g++R++k+c++rw++yl OIT29429 14 RGPWSPEEDAKLKSYIEQNGTGgNWIALPPKIGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 36.2 | 1.4e-11 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++ eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ OIT29429 70 GFSDEEDRIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 699*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence |
MGRAPCCDKN NVKRGPWSPE EDAKLKSYIE QNGTGGNWIA LPPKIGLNRC GKSCRLRWLN 60 YLRPNIKHGG FSDEEDRIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGK 120 QRQKQGSRKG KEINSNMVIS NNNNNNQFPC WPELPILQPI PYSNDEPRFN DHSSIRKLLI 180 KLGGKFSDEY QPINEATNPQ YPMDNSLLMH HNSPINLISS APIDNVLANA QYNMDRAASS 240 FTAELEHMIQ NNQQKLDGLE FLYDQDMLID KSASTSGGSM DWDAMNPFVF PLPPINDEGF 300 QQGVIIQEGA FDELRYPMAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-77 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT29429 |