PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

OIT29421

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

FAR1

Protein Properties

Length: 789aa MW: 90304.3 Da PI: 7.443

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT29421	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.4	8.9e-27	50	135	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ ++ + +t+Cka+++vk++ dgkw ++++e+eHnHel p OIT29421 50 FYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYEKS----ANRPPCAKTDCKASMHVKRRPDGKWIIHRFEKEHNHELLP 135 9*************************************998877....888899*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 789 aa Download sequence
MLVVVEEKMH AEDGGDMNTP VANIIEFKED VNLEPLAGME FESHGEAYAF YQEYARSMGF 60 NTAIQNSRRS KTSREFIDAK FACSRYGTKR EYEKSANRPP CAKTDCKASM HVKRRPDGKW 120 IIHRFEKEHN HELLPAQAVS EQTRRMYAAM ARQFAEYKNV VGLKSDSKGP FEKGRNSAME 180 GGDINVLLEF FIQMQSLNSN FFYAVDVGED QRVKNLFWVD AKARHDYANF SDVVSFDTTY 240 IRNKYKMPLA LFVGVNQHYQ FMLLGCALVS DESATTFSWV MRTWLKAMGG QAPKTVITDH 300 DQVLKSVISE ALPSSLHYFC MWHILGKVSE TLNHVIKQNE KFMAKFEKCI YRSSTDEEFE 360 KRWRKLVDRF DLREAELIHL LYEDRVKWIP TFMRDAFLAG MSTVQRSESV NSFFDKYVHK 420 KTTVQEFVKQ YETILQDRYE EEAKADSDTW NKQPALKSPS PFEKHVAGLY THAVFKKFQA 480 EVLGAVACIP KREQQDETTI TFGVKDYEKN QDFIVTLNEV KSEISCVCHL FEFKGYLCRH 540 ALIVLQICGV SSIPLQYILK RWTKDAKSKY SMTDGSEDVQ SRVQRYNELC YRAMKLSEEG 600 SLSQESYSFA LRALDDAFGS CMTFNNSNKN IVEAGTSSAP GLLCVEDDNQ SRSMSKTNKK 660 KNSFTKKRKV NSEPDVMAVG AADSLQQMDK LNSRPVTLDG YFGPQQSVQG MLNLMAPTRD 720 NYYGNQQTIQ GLGQLNSIAP THDGYYGAQP TMHGLGQMDF FRAPSFPYGI RDEPNVRSAQ 780 LHDEASRHP

Sequence ? help Back to Top

Protein Sequence Length: 789 aa Download sequence

MLVVVEEKMH AEDGGDMNTP VANIIEFKED VNLEPLAGME FESHGEAYAF YQEYARSMGF  60
NTAIQNSRRS KTSREFIDAK FACSRYGTKR EYEKSANRPP CAKTDCKASM HVKRRPDGKW  120
IIHRFEKEHN HELLPAQAVS EQTRRMYAAM ARQFAEYKNV VGLKSDSKGP FEKGRNSAME  180
GGDINVLLEF FIQMQSLNSN FFYAVDVGED QRVKNLFWVD AKARHDYANF SDVVSFDTTY  240
IRNKYKMPLA LFVGVNQHYQ FMLLGCALVS DESATTFSWV MRTWLKAMGG QAPKTVITDH  300
DQVLKSVISE ALPSSLHYFC MWHILGKVSE TLNHVIKQNE KFMAKFEKCI YRSSTDEEFE  360
KRWRKLVDRF DLREAELIHL LYEDRVKWIP TFMRDAFLAG MSTVQRSESV NSFFDKYVHK  420
KTTVQEFVKQ YETILQDRYE EEAKADSDTW NKQPALKSPS PFEKHVAGLY THAVFKKFQA  480
EVLGAVACIP KREQQDETTI TFGVKDYEKN QDFIVTLNEV KSEISCVCHL FEFKGYLCRH  540
ALIVLQICGV SSIPLQYILK RWTKDAKSKY SMTDGSEDVQ SRVQRYNELC YRAMKLSEEG  600
SLSQESYSFA LRALDDAFGS CMTFNNSNKN IVEAGTSSAP GLLCVEDDNQ SRSMSKTNKK  660
KNSFTKKRKV NSEPDVMAVG AADSLQQMDK LNSRPVTLDG YFGPQQSVQG MLNLMAPTRD  720
NYYGNQQTIQ GLGQLNSIAP THDGYYGAQP TMHGLGQMDF FRAPSFPYGI RDEPNVRSAQ  780
LHDEASRHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein

Link Out ? help Back to Top
Ensembl	OIT29421