PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29105
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 338aa    MW: 37243.7 Da    PI: 6.2375
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29105genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.4e-18232265134
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
               C +C  tkTp+WR gp g+ktLCnaCG++y+k +
  OIT29105 232 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKKGR 265
               99******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGSNLVDEID CASFFDHMDD LIEFSQENEC GDLDSTDCKN FPSICNDPLP DSDSLFFGSH  60
RNSPSDFSAE LLVPYEDIVQ LEWLSTFVED SFSCGGLTMG KEHFPVNKEP SHSKFLSSSP  120
VSVLESSSSS SSSSGAGKTT PPLSPCRRGT QRARSKRPRP AAFNPRPVSQ LMSPTSSFTE  180
IHQQFVAPED TLESDNFGES PMKKKRIKFS IPLVPVDTNQ NYQRALQTVR KCMHCEITKT  240
PQWRAGPMGP KTLCNACGVR YKKGRLFPEY RPAAAPTFVP SLHSNSHKKV LEMRSNVFPE  300
DTHDKQAAPC SIRPLSPGPP ESNATAGTSI AQSDFNPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156160KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.18e-41GATA family protein