PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT29075 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 301aa MW: 34698.2 Da PI: 4.3921 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.7 | 4.2e-18 | 81 | 134 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ ++q++ Le+ Fe ++++ e++ +LA++lgL+ rq+ +WFqNrRa++k OIT29075 81 KKRRLLPNQVQFLEKSFEVDNKLEPERKVQLAQELGLQPRQIAIWFQNRRARYK 134 45578899*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 123.6 | 9.2e-40 | 80 | 171 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl +qv++LE+sFe ++kLeperKv+la+eLglqprq+a+WFqnrRAR+ktk lEkdy++Lk+++d+lk++ ++L ke+e+Lr+e++ OIT29075 80 EKKRRLLPNQVQFLEKSFEVDNKLEPERKVQLAQELGLQPRQIAIWFQNRRARYKTKLLEKDYDVLKASFDKLKDDYDTLFKENENLRNEVD 171 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MEVGRVNEGS NMTTTNTVLP SEVLHNLWMS NSSPSFHGPT SMVNFEDGRG EITKERPFFS 60 PNDKEETSND DYDSCFHQPE KKRRLLPNQV QFLEKSFEVD NKLEPERKVQ LAQELGLQPR 120 QIAIWFQNRR ARYKTKLLEK DYDVLKASFD KLKDDYDTLF KENENLRNEV DLLKENLLRR 180 EKGKENSEQS EPINPIDAEE AQKSSPIVVI SEVPSIQKVV CKQEDASSAK SDVIDSDSPH 240 YTDGNHSSNA FEPEPSDFSQ DEDDNLSKSF LCFPEIGDQI QANSCNLGFQ IEDQPCWFWQ 300 Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-44 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT29075 |