PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT29022 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 26773.3 Da PI: 8.227 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.7 | 2.8e-10 | 96 | 140 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P++ K++ a++L + +Y+k L OIT29022 96 HSIAERLRRERISERIKALQELVPSC-----NKNDRAAMLDEILDYVKFL 140 99***********************8.....6****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MASNPPEGYA AGDDFLEQIL LRSFCSEART RSNEHGKFIS RSRTFAISCS SPHCLQVHQV 60 QPSQGQPASS TAVTVPHPPA IRPRVRARRG QATDPHSIAE RLRRERISER IKALQELVPS 120 CNKNDRAAML DEILDYVKFL RLQVKVLSMS RLGGASAVAQ LVADIPLQSV ETSLSRQYFS 180 GESRSNQHVW EKWSNAETEQ EVAKLMEEDV GAAMQFLQSK SLCIIPISLG TLIYPTQQTD 240 G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 106 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 1e-56 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT29022 |